Definitions

Textbook Highlights

Describe how removing a limb bud, or grafting on an extra limb bud, affects the number of motor neurons in a chick embryo.

Fate switching/differentiation on the control side?

Was there a factor from the limb that kept motor neurons alive?

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Evidence that Decline in Motor Neuron Cell Number is Due to Cell Death

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Describe a Campenot chamber and how experiments using this device demonstrated that NGF on distal neurites could promote survival.

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Figure 7.11

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Match the list of neurotrophic factors with the Trk receptor(s) they bind with high-affinity. Describe the binding affinity of neurotrophic factors with the p75 receptor.

P75

Track Receptors

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List the sensory neuron types that depend on neurotrophic factors for survival during development.

Predict the sensory neuron survival phenotypes of knockout mice for neurotrophic factors or their receptors.

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Crowley 1994

“Mice lacking nerve growth factor display perinatal loss of sensory and sympathetic neurons yet develop basal forebrain cholinergic neurons”

  1. Figure 1B shows a Southern blot to confirm the genotype of a number of different offspring from matings between heterozygous parents. Do the numbers listed in the text of the frequency of different genotypes observed suggest any prenatal lethality from this mutation? Explain why or why not.

    • Genotype Frequencies in Offspring:

      • Homozygous (-/-): 24%

      • Heterozygous (+/-): 44%

      • Wild Type (+/+): 29%

      • Note: 3% were lost to cannibalism.

    • Analysis of Prenatal Lethality:

      • Expected Mendelian Ratios:

        • In a typical Mendelian cross between two heterozygous parents, the expected ratio of offspring genotypes is 1:2:1 (25% homozygous recessive, 50% heterozygous, 25% homozygous dominant).

      • Observed Ratios:

        • The observed ratios are 24% (-/-), 44% (+/-), and 29% (+/+).

      • Comparison with Expected Ratios:

        • The observed ratios are close to the expected Mendelian ratios.

        • A slight deviation is present but not significantly large.

      • Implications for Prenatal Lethality:

        • The closeness of the observed ratios to the expected Mendelian ratios suggests that there is no significant prenatal lethality associated with this mutation.

        • If prenatal lethality were a significant factor, a more pronounced deviation from the expected ratios would be observed, especially a lower percentage of homozygous (-/-) offspring.

    • Additional Observations:

      • Survival in Utero:

        • The ratios demonstrate that animals homozygous for the gene disruption are not compromised with regard to survival in utero.

      • Postnatal Observations:

        • Homozygous (-/-) mice are smaller at birth and have some developmental delays, but these do not indicate prenatal lethality.

    In conclusion, the frequencies of different genotypes observed do not suggest any significant prenatal lethality from this mutation. The slight deviation from the expected Mendelian ratios can be attributed to factors other than prenatal lethality, such as postnatal viability or environmental factors.

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  2. What is the nodose ganglion and why would it be a useful comparison ganglion in these experiments?

    • What is the Nodose Ganglion?

      • The nodose ganglion is a type of sensory ganglion.

      • It is associated with the vagus nerve and contains the cell bodies of sensory neurons.

      • These neurons are involved in transmitting various types of sensory information, including visceral sensations.

    • Relevance in the Experiments:

      • Comparison with Other Ganglia:

        • The study examines the effects of nerve growth factor (NGF) deficiency on different types of ganglia, including the nodose ganglia.

        • The nodose ganglia did not show significant size differences compared to those of normal (+/+) littermates, indicating a lesser or no impact of NGF deficiency on these ganglia.

      • Contrast with Superior Cervical Ganglia (SCGs):

        • SCGs from NGF-deficient (-/-) animals were not visible upon dissection by postnatal day 14, indicating severe cell loss.

        • In contrast, the nodose ganglia displayed only rare instances of apoptotic neurons and were similar in appearance to those of normal mice.

      • Indicative of Selective Impact of NGF Deficiency:

        • This contrast suggests that NGF plays a selective role in the development of some sensory neurons but not others.

        • The nodose ganglia's relative normalcy in NGF-deficient mice indicates that these neurons might not be as dependent on NGF for survival or development as neurons in other ganglia, like the SCGs or dorsal root ganglia (DRGs).

    • Importance in Understanding NGF's Role:

      • Selective Influence on Neuronal Development:

        • The findings from the nodose ganglia provide evidence that NGF's influence on neuronal development and survival is selective.

        • It supports the hypothesis that not all sensory neurons are equally affected by NGF deficiency.

      • Comparative Analysis:

        • By comparing the effects of NGF deficiency on different types of ganglia, researchers can better understand the specific roles and mechanisms of NGF in neuronal development and survival.

    • In summary, the nodose ganglion serves as a crucial comparison point in these experiments to demonstrate the selective impact of NGF deficiency on different types of sensory neurons. Its relative normalcy in the context of NGF deficiency contrasts with the severe effects observed in other ganglia, thereby highlighting the specific and varied roles of NGF in neuronal development.

  3. What is the take-home message of the histological stains of various ganglia shown in Figure 2?

    • Overview of Figure 2:

      • The figure presents histological appearances of sensory and sympathetic ganglia in 3-day-old mice.

      • It compares wild-type (B, D, G, H) and homozygous mutant (A, C, E, F) genotypes.

      • The ganglia examined include the Superior Cervical Ganglion (SCG), Nodose Ganglion, and the Fifth Lumbar Dorsal Root Ganglion (DRG).

    • Key Observations:

      • Superior Cervical Ganglion (SCG):

        • In the mutant mouse, the SCG shows numerous pyknotic nuclei, indicative of cell death (arrowheads in A).

        • This contrasts with the wild-type, where such features are not prominent.

      • Nodose Ganglion:

        • The nodose ganglion in the mutant does not show significant differences in appearance compared to the wild-type.

        • This suggests a lesser impact of the mutation on these ganglia.

      • Dorsal Root Ganglion (DRG):

        • The DRG of the wild-type animal shows numerous small neurons (arrowheads in H).

        • In contrast, the mutant DRG displays no small cells, indicating a significant impact of the mutation.

    • Implications:

      • Selective Vulnerability:

        • These observations suggest a selective vulnerability of certain types of neurons to the genetic mutation.

        • The SCG and DRG in mutants show significant changes, indicating a higher sensitivity to the mutation.

      • Role of NGF:

        • Given the nature of the mutation (NGF deficiency), these findings highlight the critical role of nerve growth factor (NGF) in the survival and maintenance of certain neuronal populations.

        • The differential impact on various ganglia suggests that NGF's role is more crucial in some neuronal types (like those in SCG and DRG) than others (like those in the nodose ganglion).

    • Conclusion:

      • The histological analysis in Figure 2 demonstrates the selective effect of NGF deficiency on different types of ganglia, underlining the importance of NGF in the development and survival of specific neuronal populations. The contrasting responses of these ganglia to NGF deficiency provide valuable insights into the varied roles and mechanisms of NGF in the nervous system.

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  4. One of the major findings in this paper is the selective loss of neurons in the sensory ganglia (DRGs). List the sources (Tables and/or Figure panels) of data that provide the evidence for this conclusion.

    • Figure 2 (E-H):

      • Visual inspection of sections through cervical or lumbar ganglia.

      • Observations include fewer neuronal profiles in the ganglia of (-/-) mice compared to (+/+) mice.

      • Notably, small profiles were rare in the ganglia of (-/-) mice.

    • Figure 3:

      • Figure 3A: Cell size histograms from lumbar DRGs of (+/+) or (-/-) mice, showing the absence of small cells (<15 µm in diameter) in the ganglia of (-/-) animals.

      • Figure 3B: In situ hybridization of cervical DRGs for neurotrophin receptors, indicating the absence of detectable trkA mRNA in ganglia from (-/-) mice, but the presence of cells expressing trkB and trkC.

    • Figure 4:

      • CGRP immunoreactivity in DRG neurons of 3-day-old mice of different genotypes.

      • The (-/-) animals showed a complete absence of CGRP-immunoreactive processes in the dorsal horn of the spinal cord and the skin, compared to (+/+) animals.

    • Table 2:

      • Neuronal cell counts from the fourth and fifth lumbar ganglia.

      • A 70% reduction in cell number was observed in (-/-) mice, with a marginally significant decrease in cell number in (+/-) animals compared to their (+/+) littermates.

    • These sources collectively provide comprehensive evidence for the selective loss of neurons in the sensory ganglia (DRGs), particularly in the context of NGF deficiency in the studied mice.

  5. Why is the fact that DRGs from knockout (-/-) mice were "devoid of detectable trkA mRNA" a significant finding? Are the cells simply not expressing this gene or they missing in these DRGs?

    • trkA mRNA and Its Role:

      • trkA is the high-affinity receptor for nerve growth factor (NGF).

      • It plays a crucial role in the survival and maintenance of certain types of sensory neurons, particularly those responsive to NGF.

    • Implications of the Absence of trkA mRNA:

      • Selective Neuronal Loss:

        • The absence of detectable trkA mRNA in the DRGs of (-/-) mice suggests that neurons normally expressing this receptor are either missing or significantly reduced in number.

        • This aligns with the observed 70% reduction in DRG cell numbers in NGF null mutant mice.

      • Dependence on NGF for Survival:

        • The finding implies that DRG neurons expressing trkA are highly dependent on NGF for their survival.

        • In the absence of NGF (as in the knockout mice), these neurons likely undergo apoptosis or fail to develop properly.

      • Lack of Redundant Trophic Support:

        • The absence of trkA mRNA indicates that these neurons do not have redundant trophic support from other neurotrophins, making them particularly vulnerable to NGF deficiency.

    • Differentiation Between Non-Expression and Absence of Neurons:

      • Potential Non-Expression:

        • It's possible that some DRG neurons survive but down-regulate trkA expression to undetectable levels in the absence of NGF.

      • Neuronal Absence:

        • However, the significant reduction in neuron numbers and the lack of small neurons in the DRGs of (-/-) mice suggest that many of these neurons are indeed missing, not just non-expressive of trkA.

    • Overall Significance:

      • This finding is significant as it highlights the critical role of NGF in the development and survival of specific sensory neurons.

      • It provides insight into the molecular mechanisms underlying the development of the sensory nervous system and the specific requirements of different neuronal populations for survival and maintenance.

    • In summary, the absence of detectable trkA mRNA in the DRGs of knockout mice is a significant finding as it underscores the essential role of NGF and its high-affinity receptor trkA in the survival of specific sensory neurons. This absence likely reflects both the loss of neurons and the potential down-regulation of trkA expression in surviving neurons under NGF-deprived conditions.

  6. Homozygous mutants show reduced responses in some assays to test pain, but not in others. Which tests demonstrate an effect and which do not? Why do you think this may be the case?

    • Tests Demonstrating an Effect:

      • Noxious Mechanical Stimulus Response:

        • Mice were tested for their response to a pinch applied to the tail.

        • Homozygous (-/-) mice very rarely responded to this noxious stimulus, in contrast to (+/+) and (+/-) mice, who reacted reliably.

        • The response in (+/+) and (+/-) mice consisted of vigorous squirming accompanied by vocalization.

        • The difference in response frequencies as a function of genotype was highly significant.

    • Tests Not Demonstrating an Effect:

      • Thermal Pain Response:

        • Mice were tested for responsiveness to thermal pain in two paradigms: the tail flick and hot plate test.

        • In the hot plate test, no significant differences in behavior were observed between the genotypes.

        • However, in the tail flick test, (+/-) animals displayed a small but significant prolongation of latency, indicating some degree of reduced sensitivity to pain.

    • Possible Reasons for Differential Responses:

      • Selective Neuronal Loss:

        • The selective loss of neurons in sensory ganglia, particularly those expressing trkA (the high-affinity receptor for NGF), in (-/-) mice could explain their reduced sensitivity to mechanical pain stimuli.

        • These neurons are likely involved in transmitting pain signals, and their absence or reduction would diminish the pain response.

      • Different Pain Pathways:

        • The differential response in thermal vs. mechanical pain tests suggests that these modalities might be mediated by different types of sensory neurons.

        • Neurons that respond to thermal stimuli may be less affected by the NGF deficiency, or other types of neurotrophins might compensate for NGF in these pathways.

      • Complexity of Pain Perception:

        • Pain perception is a complex process involving multiple types of sensory neurons, signaling pathways, and central processing mechanisms.

        • The NGF deficiency might affect some aspects of this system while leaving others relatively intact.

    • In summary, the study demonstrates that homozygous mutant mice show a marked reduction in response to mechanical pain stimuli but not to thermal pain stimuli. This differential response is likely due to the selective loss of certain types of sensory neurons and the complexity of the pain perception system, which involves multiple pathways and mechanisms.

  7. Summarize the findings of this paper in one or two sentences. What experiments do you think would be important to try next?

    • The study demonstrates that the absence of a functional NGF gene in mice leads to severe cell loss in sensory and sympathetic ganglia, reduced viability, and marked changes in pain sensitivity. Specifically, there is a significant reduction in the number of sensory neurons in the dorsal root ganglia (DRGs), especially those expressing trkA, and a decreased response to noxious mechanical stimuli, but not to thermal pain.

    • For future experiments, the following could be important to explore:

      • Investigating Compensatory Mechanisms:

        • Examining whether other neurotrophins or their receptors compensate for the loss of NGF in sensory and sympathetic neurons.

        • This could involve studying the expression and function of other neurotrophin receptors like trkB and trkC in NGF-deficient mice.

        • Neurological and Behavioral Analysis:

          • Conducting detailed neurological and behavioral studies to understand the full spectrum of sensory deficits in NGF-deficient mice.

          • This could include more nuanced pain assays to dissect the types of pain (e.g., chronic vs. acute) affected by NGF deficiency.

        • Developmental Studies:

          • Investigating the developmental timeline of neuronal loss and dysfunction in these mice.

          • This would help in understanding at what stage NGF becomes critical for neuronal survival and function.

      • Therapeutic Interventions:

        • Exploring potential therapeutic interventions to rescue or mitigate the neuronal loss and sensory deficits in NGF-deficient mice.

          • This could involve gene therapy, neurotrophin supplementation, or other pharmacological approaches.

Ernfors 1994

  1. Figure 1, how do the authors using the restriction enzyme BamHI to differentiate between the wild-type and mutant alleles in their Southern blots?

    • 2 BamH1 sites that flank thee NT3 region

      • cut out a piece thats 15 kbp

      • introduced neomycin

      • Probe only binds that specific region of DNA

      • allows them to be certain the homologous recombination works

  2. Figure 1C depicts genotype analysis for a cross between two heterozygous (+/-) parents. In your reading of the Southern blot shown in this panel, how many homozygous mutant (-/-) animals are found in this litter?

    • Wild Type = only has 1 band @ 15 kb

      • Heterozygous = has both bands

      • Homozygous / mutants / knockout = only 1 band @ 6.1 kB

  3. Cell counts in six different ganglia and nuclei are presented in Table 1. What type of neurons are found in each of the ganglia/nuclei? Why do you think the authors chose these structures to analyze?

    • To see the difference between the sensory and sympathetic neurons

      • are their populations that depend on NT-3 ? and which ones don't ?

      • Trigeminal ganglion

        • affected

  1. Compare the data in Table 1 with Table 7.1 in the textbook. Are the changes in neuron number similar for NT-3 and TrkC mutants? What differences do you notice and what could that mean for the neurotrophic support of those types of neurons?

    • Table 7.1 = TrkC = lose 20%

      • in Table 1 in paper , they loose about 50%

      • why?

        • knockout NT-3 , loose half the cells

        • knockout TrckC = loose 20%

        • so TrkB , there is some low affinity binding of NT-3

          • See figure 7.12

        • they are binding more than 1 neurotrophin for TrkB

  2. Figure 2A and 2B are micrograph cross-sections of the soleus stained for slow-tonic myosin heavy chain protein by immunohistochemistry. What is the significance of the lack of staining in the homozygous mutant animal? What do the authors conclude from this staining (see also Table 2)?

    • muscle spindles have a different type of myosin

      • Wild-Type = regular muscle fibers = lots of muscle spindles

      • Heterozygous = half

      • Knockout = none

      • Muscle Spindles = express TrkC , sensory neurons

      • just proprioceptors that are affected

  3. What type of tissue is used in the DiI tracing shown in Figure 3? Is this tissue alive during the tracing process?

    • DiI = flourecent lipophilic molecule

      • stays inside of a membrane

        • dead tissue , fixed in paraformaldehyde

  4. List the similarities and differences in the axon projections in the spinal cord in control and homozygous mutants in Figure 3.

    • Similarities :

      • layers of spinal cord , pain and touch fibers ( area 1 , 2 , 3 , 4 )

        • these are fine , and are present in the spinal cord

        • Differences :

        • C = proprioceptive neurons send axnos down , into the spinal cord

        • D = neurons are dead

          • axons are not present in the spinal cord

  5. Please complete the table below for each of the different categories of sensory neurons evaluated in the DRG in Figure 4.

AntigenType of Neuron it MarksStatus in NT-3 Homozygous Mutant
CAsensory , proprioceptivepanel A / B = a few left in knockout
PVproprioceptivepanel C / D = none
SPpain / nociceptorspanel E / F = no change
CGRPnociceptorspanel G / H = no change