20.3 Evolution of a Universal Mechanism for ATP Synthesis

The combined activities of the two plant photosystems move electrons from water to NADP+NADP Superscript plus, conserving some of the energy of absorbed light as NADPH (Fig. 20-12). Simultaneously, protons are pumped across the thylakoid membrane and energy is conserved as an electrochemical potential. We turn now to the process by which this proton gradient drives the synthesis of ATP, the other energy-conserving product of the light-dependent reactions.

A Proton Gradient Couples Electron Flow and Phosphorylation

Although the energy source and electron carriers in photophosphorylation in chloroplasts differ from those of oxidative phosphorylation in mitochondria, they use essentially the same mechanism to capture the energy of the proton gradient. Electron-transferring molecules in the chain of carriers connecting PSII and PSI are oriented asymmetrically in the thylakoid membrane, so photoinduced electron flow results in the net movement of protons across the membrane, from the stromal side to the thylakoid lumen (Fig. 20-21).

A figure shows how proton and electron circuits interact during photophosphorylation.

FIGURE 20-21 Proton and electron circuits during photophosphorylation. In the linear electron pathway (blue arrows), electrons move from H2Oupper H Subscript 2 Baseline upper O through PSII, through the intermediate chain of carriers of the cytochrome b6fb 6 f complex, through PSI, and finally to NADP+NADP Superscript plus. In the cyclic pathway, electrons move from PSI back to plastoquinone and cytochrome b6fb 6 f. Protons (red arrows) are pumped into the thylakoid lumen by the flow of electrons through cytochrome b6fb 6 f, and they reenter the stroma through proton channels formed by CFoCF Subscript o of ATP synthase. The CF1CF Subscript 1 subunit catalyzes synthesis of ATP.

The Approximate Stoichiometry of Photophosphorylation Has Been Established

As electrons move from water to NADP+NADP Superscript plus in chloroplasts, about 12 protons move from the stroma into the thylakoid lumen per 4 electrons passed (that is, per O2upper O Subscript 2 formed). Of these protons, 4 are moved by the oxygen-evolving center, and up to 8 are moved by the cytochrome b6fb 6 f complex. The measurable result is a 1,000-fold difference in H+upper H Superscript plus concentration across the thylakoid membrane (ΔpH=3)left-parenthesis normal upper Delta p upper H equals 3 right-parenthesis. Recall that the energy stored in a proton gradient (the electrochemical potential) has two components: a proton concentration difference (ΔpH)left-parenthesis normal upper Delta pH right-parenthesis and an electrical potential (Δψ)left-parenthesis normal upper Delta psi right-parenthesis due to charge separation. In chloroplasts, ΔpHnormal upper Delta pH is the dominant component; counterion movement apparently dissipates most of the electrical potential. In illuminated chloroplasts, the energy stored in the proton gradient per mole of protons is

ΔG=2.3RT ΔpH+ZF Δψ=17 kJ/molnormal upper Delta upper G equals 2.3 upper R upper T normal upper Delta p upper H plus upper Z upper F normal upper Delta psi equals negative 17 kJ slash mol

so the movement of 12 mol of protons across the thylakoid membrane represents conservation of about 200 kJ of energy — enough energy to drive the synthesis of several moles of ATP (ΔG°=30.5 kJ/mol)left-parenthesis normal upper Delta upper G Superscript prime Baseline degree equals 30.5 kJ slash mol right-parenthesis. Experimental measurements yield values of about 3 ATP per O2upper O Subscript 2 produced.

At least 8 photons must be absorbed to drive 4 electrons from 2 H2O2 upper H Subscript 2 Baseline upper O to 2 NADPH (one photon per electron at each reaction center). The energy in 8 photons of visible light is more than enough for the synthesis of three molecules of ATP.

ATP synthesis is not the only energy-conserving reaction of photosynthesis in plants; the NADPH formed in the final electron transfer is also energetically rich. The overall equation for this linear photophosphorylation is

2H2O+8 photons+2NADP++3ADP++3PiO2+3ATP+2NADPH2 normal upper H 2 normal upper O plus 8 p h o t o n s plus 2 upper N upper A upper D upper P Superscript plus Baseline plus tilde 3 upper A upper D upper P Superscript plus Baseline plus tilde 3 normal upper P Subscript normal i Baseline right-arrow normal upper O 2 plus tilde 3 ATP plus 2 NADPH

(20-6)

The ATP Synthase Structure and Mechanism Are Nearly Universal

The enzyme responsible for ATP synthesis in chloroplasts is a large complex with two functional components, CFoCF Subscript o and CF1CF Subscript 1 (C denoting its location in chloroplasts). CFoCF Subscript o is a transmembrane proton pore composed of several integral membrane proteins and is homologous to mitochondrial Foupper F Subscript o. CF1CF Subscript 1 is a peripheral membrane protein complex very similar in subunit composition, structure, and function to mitochondrial F1upper F Subscript 1.

Electron microscopy of sectioned chloroplasts shows ATP synthase complexes as projections on the outside (stromal, or n) surface of thylakoid membranes; these complexes correspond to the ATP synthase complexes that project on the inside (matrix, or n) surface of the inner mitochondrial membrane. Thus, the relationship between the orientation of the ATP synthase and the direction of proton pumping is the same in chloroplasts and mitochondria. In both cases, the F1upper F Subscript 1 portion of ATP synthase is located on the more alkaline (n) side of the membrane through which protons flow down their concentration gradient; the direction of proton flow relative to F1upper F Subscript 1 is the same in both cases: p to n (Fig. 20-22).

A figure shows the orientation of A T P synthase in a mitochondrion, a chloroplast, and a bacterium to show that it is fixed relative to the proton gradient.

FIGURE 20-22 Orientation of ATP synthase is fixed relative to the proton gradient. Superficially, the direction of proton pumping in chloroplasts may seem to be opposite to that in mitochondria and bacteria. In mitochondria and bacteria, protons are pumped out of the organelle or cell, and F1upper F Subscript 1 is on the inside of the membrane; in chloroplasts, protons are pumped into the thylakoid lumen, and CF1CF Subscript 1 is on the outside of the thylakoid membrane. However, exactly the same mechanism of energy conversion (from proton gradient to ATP) occurs in all three cases. ATP is synthesized in the matrix of mitochondria, the stroma of chloroplasts, and the cytosol of bacteria.

The mechanism of chloroplast ATP synthase is essentially identical to that of its mitochondrial analog; ADP and Piupper P Subscript i readily condense to form ATP on the enzyme surface, and the release of this enzyme-bound ATP requires a proton-motive force. Rotational catalysis sequentially engages each of the three β subunits of the ATP synthase in ATP synthesis, ATP release, and ADP+Piupper A upper D upper P plus normal upper P Subscript normal i binding (see Figs. 19-26 and 19-27).

The appearance of oxygenic photosynthesis on Earth about 2.5 billion years ago was a crucial event in the evolution of the biosphere. Before that, Earth’s atmosphere was composed of methane, CO2CO Subscript 2, and N2upper N Subscript 2. The planet was essentially devoid of molecular oxygen and lacked the ozone layer that protects organisms from solar UV radiation. Oxygenic photosynthesis made available a nearly limitless supply of reducing agent (H2O)left-parenthesis upper H Subscript 2 Baseline upper O right-parenthesis to drive the production of organic compounds by reductive biosynthetic reactions. And mechanisms evolved that allowed organisms to use O2upper O Subscript 2 as a terminal electron acceptor in highly energetic electron transfers from organic substrates, employing the energy of oxidation to support metabolism. The complex photosynthetic apparatus of a modern vascular plant is the culmination of a series of evolutionary events, the most recent of which was the acquisition by eukaryotic cells of a cyanobacterial endosymbiont.

The chloroplasts of modern organisms share several properties with mitochondria and originated by the same mechanism that gave rise to mitochondria: endosymbiosis. Like mitochondria, chloroplasts contain their own DNA and protein-synthesizing machinery. Some of the polypeptides of chloroplast proteins are encoded by chloroplast genes and synthesized in the chloroplast; others are encoded by nuclear genes, synthesized outside the chloroplast, and imported (Chapter 27). When plant cells grow and divide, chloroplasts give rise to new chloroplasts by division, during which their DNA is replicated and divided between daughter chloroplasts. The machinery and mechanisms for light capture, electron flow, and ATP synthesis in modern cyanobacteria are similar in many respects to those in plant chloroplasts. These observations led to the now widely accepted hypothesis that the evolutionary progenitors of modern plant cells were primitive eukaryotes that engulfed photosynthetic cyanobacteria and established stable endosymbiotic relationships with them (see Fig. 1-37).

At least half of the photosynthetic activity on Earth now occurs in microorganisms — algae, other photosynthetic eukaryotes, and photosynthetic bacteria. Cyanobacteria have PSII and PSI in tandem, and the PSII has an associated oxygen-evolving activity resembling that of plants. However, the other groups of photosynthetic bacteria have single reaction centers and do not split H2Oupper H Subscript 2 Baseline upper O or produce O2upper O Subscript 2. Many are obligate anaerobes and cannot tolerate O2upper O Subscript 2; they must use some compound other than H2Oupper H Subscript 2 Baseline upper O as an electron donor. Some photosynthetic bacteria use inorganic compounds as electron (and hydrogen) donors. For example, green sulfur bacteria use hydrogen sulfide:

2H2S+CO2 light (CH2O)+H2O+2S2 normal upper H 2 normal upper S plus upper C upper O 2 right-arrow Overscript l i g h t Endscripts left-parenthesis upper C upper H 2 normal upper O right-parenthesis plus normal upper H 2 normal upper O plus 2 normal upper S

These bacteria, instead of producing molecular O2upper O Subscript 2, form elemental sulfur as the oxidation product of H2Supper H Subscript 2 Baseline upper S. (They further oxidize the S to SO42SO Subscript 4 Superscript 2 minus.) Other photosynthetic bacteria use organic compounds such as lactate as electron donors:

2 Lactate+CO2 light (CH2O)+H2O+2 pyruvate2 upper L a c t a t e plus upper C upper O 2 right-arrow Overscript light Endscripts left-parenthesis upper C upper H 2 normal upper O right-parenthesis plus normal upper H 2 normal upper O plus 2 p y r u v a t e

The fundamental similarity of photosynthesis in plants and bacteria, despite the differences in the electron donors they employ, becomes more obvious when the equation of photosynthesis is written in the more general form

2H2D+CO2 light (CH2O)+H2O+2D2 normal upper H 2 normal upper D plus upper C upper O 2 right-arrow Overscript l i g h t Endscripts left-parenthesis upper C upper H 2 normal upper O right-parenthesis plus normal upper H 2 normal upper O plus 2 normal upper D

in which H2Dupper H Subscript 2 Baseline upper D is an electron (and hydrogen) donor and D is its oxidized form. H2Dupper H Subscript 2 Baseline upper D may be water, hydrogen sulfide, lactate, or some other organic compound, depending on the species. Most likely, the bacteria that first developed photosynthetic ability used H2Supper H Subscript 2 Baseline upper S as their electron source.

Modern cyanobacteria can synthesize ATP by oxidative phosphorylation or by photophosphorylation, although they have neither mitochondria nor chloroplasts. The enzymatic machinery for both processes is in a highly convoluted plasma membrane (Fig. 20-23). Three protein components function in both processes, giving evidence that the processes have a common evolutionary origin (Fig. 20-24). First, the proton-pumping cytochrome b6fb 6 f complex carries electrons from plastoquinone to cytochrome c6c 6 in photosynthesis, and also carries electrons from ubiquinone to cytochrome c6c 6 in oxidative phosphorylation — the role played by cytochrome bc1b c 1 in mitochondria. Second, cytochrome c6c 6, homologous to mitochondrial cytochrome c, carries electrons from Complex III to Complex IV in cyanobacteria; it can also carry electrons from the cytochrome b6fb 6 f complex to PSI — a role performed in plants by plastocyanin. We therefore see the functional homology between the cyanobacterial cytochrome b6fb 6 f complex and the mitochondrial cytochrome bc1b c 1 complex, and between cyanobacterial cytochrome c6c 6 and plant plastocyanin. The third conserved component is the ATP synthase, which functions in oxidative phosphorylation and photophosphorylation in cyanobacteria, and in the mitochondria and chloroplasts of photosynthetic eukaryotes. The structure and remarkable mechanism of this enzyme have been strongly conserved throughout evolution.

Two micrographs show structures in a cyanobacterium at different levels of magnification. The top micrograph shows an oval bacterium with many concentric membranes around the outside. The oval region inside has gray mottling and rough black spheres. The oval is about 1300 n m in length. The second micrograph shows a close-up of a similar bacterium showing an outer membrane with many concentric layers of membrane beneath above a small mottled region below. The image is about 500 n m in length.

FIGURE 20-23 The photosynthetic membranes of a cyanobacterium. In these thin sections of a cyanobacterium, viewed with a transmission electron microscope, the multiple layers of the internal membranes are seen to fill half the total volume of the cell. The extensive membrane system serves the same role as the thylakoid membranes of vascular plants, providing a large surface area containing all of the photosynthetic machinery. (Bar=100 nm.)left-parenthesis upper B a r equals 100 nm period right-parenthesis [S. R. Miller et al. Discovery of a free-living chlorophyll d-producing cyanobacterium with a hybrid proteobacterial/cyanobacterial small-subunit rRNA gene. Proc. Natl. Acad. Sci. USA 102:850, 2005, Fig. 2. © 2005 National Academy of Sciences.]

A two-part figure illustrates evolutionary origins of cytochrome italicized b end italics subscript 6 end subscript italicized f end italics and cytochrome italicized c end italics subscript 6 end subscript by comparing photophosphorylation in part a with oxidative phosphorylation in part b.

FIGURE 20-24 Dual roles of cytochrome b6fbold-italic b bold 6 bold-italic f and cytochrome c6c 6 in cyanobacteria reflect evolutionary origins. Cyanobacteria use cytochrome b6fb 6 f, cytochrome c6c 6, and plastoquinone for both oxidative phosphorylation and photophosphorylation. (a) In photophosphorylation, electrons flow (blue arrows) from water to NADP+NADP Superscript plus. (b) In oxidative phosphorylation, electrons flow from NADH to O2upper O Subscript 2. Both processes are accompanied by proton movement across the membrane, accomplished by a Q cycle.

SUMMARY 20.3 Evolution of a Universal Mechanism for ATP Synthesis